Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nhej1Q3KNJ2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Asic1-205ENSMUST00000228185 1818 ntBASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nhej1Q3KNJ2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nhej1Q3KNJ2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Mir1668-201ENSMUST00000184114 107 ntBASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nhej1Q3KNJ2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Gm26039-201ENSMUST00000158152 144 ntBASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nhej1Q3KNJ2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms