Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim63Q38HM4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.31□□□□□ -0.28
Trim63Q38HM4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 App-207ENSMUST00000227737 2827 ntBASIC13.31□□□□□ -0.28
Trim63Q38HM4 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim63Q38HM4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim63Q38HM4 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.29□□□□□ -0.28
Trim63Q38HM4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Gm22325-201ENSMUST00000158904 308 ntBASIC13.29□□□□□ -0.28
Trim63Q38HM4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.29□□□□□ -0.28
Trim63Q38HM4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim63Q38HM4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms