Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Gm15808-201ENSMUST00000119046 604 ntBASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Gm43545-201ENSMUST00000196765 2779 ntBASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 AC238811.1-201ENSMUST00000225302 441 ntBASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ush2AQ2QI47 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Mir7032-201ENSMUST00000185154 79 ntBASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Gm4984-201ENSMUST00000115987 360 ntBASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Gm37917-201ENSMUST00000194711 392 ntBASIC8.49□□□□□ -1.05
Ush2AQ2QI47 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Gm38160-201ENSMUST00000193090 2499 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Mir8109-201ENSMUST00000184375 117 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Gm18624-201ENSMUST00000220966 658 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Gm5184-201ENSMUST00000220417 1702 ntBASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Ush2AQ2QI47 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms