Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.52□□□□□ -0.25
Npas1P97459 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.52□□□□□ -0.25
Npas1P97459 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.52□□□□□ -0.25
Npas1P97459 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.52□□□□□ -0.25
Npas1P97459 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Npas1P97459 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.52□□□□□ -0.25
Npas1P97459 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Npas1P97459 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Npas1P97459 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Npas1P97459 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Npas1P97459 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Npas1P97459 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.51□□□□□ -0.25
Npas1P97459 Gm12933-201ENSMUST00000120203 872 ntBASIC13.51□□□□□ -0.25
Npas1P97459 Gm12382-201ENSMUST00000122005 922 ntBASIC13.51□□□□□ -0.25
Npas1P97459 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.51□□□□□ -0.25
Npas1P97459 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.51□□□□□ -0.25
Npas1P97459 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.51□□□□□ -0.25
Npas1P97459 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Npas1P97459 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Npas1P97459 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Npas1P97459 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Npas1P97459 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Npas1P97459 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.5□□□□□ -0.25
Npas1P97459 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Npas1P97459 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Npas1P97459 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.5□□□□□ -0.25
Npas1P97459 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.5□□□□□ -0.25
Npas1P97459 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Npas1P97459 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.5□□□□□ -0.25
Npas1P97459 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.49□□□□□ -0.25
Npas1P97459 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Npas1P97459 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.49□□□□□ -0.25
Npas1P97459 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.49□□□□□ -0.25
Npas1P97459 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.49□□□□□ -0.25
Npas1P97459 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Npas1P97459 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.49□□□□□ -0.25
Npas1P97459 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.49□□□□□ -0.25
Npas1P97459 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Npas1P97459 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Npas1P97459 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Npas1P97459 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Npas1P97459 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Npas1P97459 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Npas1P97459 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms