Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh6P97326 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cdh6P97326 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.27■□□□□ 0.2
Cdh6P97326 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cdh6P97326 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.27■□□□□ 0.2
Cdh6P97326 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Gm17807-201ENSMUST00000186869 298 ntBASIC16.27■□□□□ 0.2
Cdh6P97326 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cdh6P97326 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cdh6P97326 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh6P97326 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh6P97326 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh6P97326 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh6P97326 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh6P97326 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh6P97326 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh6P97326 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cdh6P97326 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cdh6P97326 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh6P97326 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh6P97326 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cdh6P97326 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh6P97326 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh6P97326 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh6P97326 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh6P97326 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh6P97326 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.26■□□□□ 0.19
Cdh6P97326 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh6P97326 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.26■□□□□ 0.19
Cdh6P97326 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.26■□□□□ 0.19
Cdh6P97326 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh6P97326 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.26■□□□□ 0.19
Cdh6P97326 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.26■□□□□ 0.19
Cdh6P97326 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cdh6P97326 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.26■□□□□ 0.19
Cdh6P97326 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.26■□□□□ 0.19
Cdh6P97326 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Cdh6P97326 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.25■□□□□ 0.19
Cdh6P97326 Gm44454-201ENSMUST00000198541 138 ntBASIC16.25■□□□□ 0.19
Cdh6P97326 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.25■□□□□ 0.19
Cdh6P97326 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cdh6P97326 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cdh6P97326 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cdh6P97326 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.25■□□□□ 0.19
Cdh6P97326 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cdh6P97326 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cdh6P97326 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.24■□□□□ 0.19
Cdh6P97326 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cdh6P97326 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.24■□□□□ 0.19
Cdh6P97326 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdh6P97326 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cdh6P97326 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cdh6P97326 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdh6P97326 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cdh6P97326 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms