Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.5■□□□□ 0.39
Frat1P70339 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.5■□□□□ 0.39
Frat1P70339 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.5■□□□□ 0.39
Frat1P70339 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Frat1P70339 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Frat1P70339 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Frat1P70339 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Frat1P70339 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.49■□□□□ 0.39
Frat1P70339 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.49■□□□□ 0.39
Frat1P70339 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.49■□□□□ 0.39
Frat1P70339 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.49■□□□□ 0.39
Frat1P70339 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Gm26571-201ENSMUST00000181399 666 ntBASIC17.49■□□□□ 0.39
Frat1P70339 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.49■□□□□ 0.39
Frat1P70339 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.49■□□□□ 0.39
Frat1P70339 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Frat1P70339 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Frat1P70339 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Gm12896-201ENSMUST00000118430 226 ntBASIC17.48■□□□□ 0.39
Frat1P70339 Gm13158-201ENSMUST00000122007 736 ntBASIC17.48■□□□□ 0.39
Frat1P70339 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.48■□□□□ 0.39
Frat1P70339 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Mir5133-201ENSMUST00000174955 77 ntBASIC17.48■□□□□ 0.39
Frat1P70339 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.48■□□□□ 0.39
Frat1P70339 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Gm9731-201ENSMUST00000209480 747 ntBASIC17.48■□□□□ 0.39
Frat1P70339 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Frat1P70339 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.48■□□□□ 0.39
Frat1P70339 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Frat1P70339 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Frat1P70339 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.48■□□□□ 0.39
Frat1P70339 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.47■□□□□ 0.39
Frat1P70339 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Gm10849-201ENSMUST00000100397 618 ntBASIC17.47■□□□□ 0.39
Frat1P70339 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.47■□□□□ 0.39
Frat1P70339 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.47■□□□□ 0.39
Frat1P70339 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.47■□□□□ 0.39
Frat1P70339 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Frat1P70339 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.47■□□□□ 0.39
Frat1P70339 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Frat1P70339 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms