Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lmo4P61969 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.95□□□□□ -0.34
Lmo4P61969 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lmo4P61969 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lmo4P61969 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.95□□□□□ -0.34
Lmo4P61969 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.94□□□□□ -0.34
Lmo4P61969 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.94□□□□□ -0.34
Lmo4P61969 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.94□□□□□ -0.34
Lmo4P61969 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.94□□□□□ -0.34
Lmo4P61969 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.94□□□□□ -0.34
Lmo4P61969 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.94□□□□□ -0.34
Lmo4P61969 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Lmo4P61969 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lmo4P61969 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.93□□□□□ -0.34
Lmo4P61969 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lmo4P61969 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Lmo4P61969 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 Gm2213-201ENSMUST00000197485 688 ntBASIC12.93□□□□□ -0.34
Lmo4P61969 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lmo4P61969 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lmo4P61969 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lmo4P61969 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lmo4P61969 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Lmo4P61969 Gm14494-201ENSMUST00000118786 435 ntBASIC12.92□□□□□ -0.34
Lmo4P61969 Gm15358-201ENSMUST00000119249 520 ntBASIC12.92□□□□□ -0.34
Lmo4P61969 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.92□□□□□ -0.34
Lmo4P61969 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.92□□□□□ -0.34
Lmo4P61969 Gm6257-201ENSMUST00000163864 910 ntBASIC12.92□□□□□ -0.34
Lmo4P61969 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.92□□□□□ -0.34
Lmo4P61969 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.92□□□□□ -0.34
Lmo4P61969 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.92□□□□□ -0.34
Lmo4P61969 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lmo4P61969 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lmo4P61969 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms