Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sec61a1P61620 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Gm7370-201ENSMUST00000219471 767 ntBASIC14.17□□□□□ -0.14
Sec61a1P61620 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Sec61a1P61620 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Sec61a1P61620 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sec61a1P61620 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.16□□□□□ -0.14
Sec61a1P61620 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.16□□□□□ -0.14
Sec61a1P61620 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.16□□□□□ -0.14
Sec61a1P61620 Gm18032-201ENSMUST00000222541 538 ntBASIC14.16□□□□□ -0.14
Sec61a1P61620 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sec61a1P61620 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.16□□□□□ -0.14
Sec61a1P61620 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Sec61a1P61620 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sec61a1P61620 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sec61a1P61620 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sec61a1P61620 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Gm17661-201ENSMUST00000170317 270 ntBASIC14.15□□□□□ -0.14
Sec61a1P61620 Gm6659-201ENSMUST00000174752 547 ntBASIC14.15□□□□□ -0.14
Sec61a1P61620 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.15□□□□□ -0.14
Sec61a1P61620 Il3ra-202ENSMUST00000223589 738 ntBASIC14.15□□□□□ -0.14
Sec61a1P61620 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sec61a1P61620 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.15□□□□□ -0.14
Sec61a1P61620 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Sec61a1P61620 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sec61a1P61620 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
Sec61a1P61620 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Gm16061-201ENSMUST00000122167 857 ntBASIC14.14□□□□□ -0.15
Sec61a1P61620 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.14□□□□□ -0.15
Sec61a1P61620 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sec61a1P61620 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms