Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC21.66■■□□□ 1.06
Nphp4P59240 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC21.66■■□□□ 1.06
Nphp4P59240 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nphp4P59240 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Nphp4P59240 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC21.65■■□□□ 1.06
Nphp4P59240 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nphp4P59240 Gm2213-201ENSMUST00000197485 688 ntBASIC21.65■■□□□ 1.06
Nphp4P59240 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nphp4P59240 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nphp4P59240 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nphp4P59240 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nphp4P59240 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nphp4P59240 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC21.65■■□□□ 1.06
Nphp4P59240 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nphp4P59240 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nphp4P59240 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nphp4P59240 Gm5366-201ENSMUST00000215494 1338 ntBASIC21.64■■□□□ 1.06
Nphp4P59240 AC119177.1-201ENSMUST00000227647 1332 ntBASIC21.64■■□□□ 1.06
Nphp4P59240 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nphp4P59240 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC21.64■■□□□ 1.06
Nphp4P59240 AC174742.1-201ENSMUST00000218272 304 ntBASIC21.64■■□□□ 1.06
Nphp4P59240 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nphp4P59240 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nphp4P59240 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nphp4P59240 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nphp4P59240 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nphp4P59240 Prkcz2-201ENSMUST00000206136 1756 ntBASIC21.64■■□□□ 1.05
Nphp4P59240 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nphp4P59240 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nphp4P59240 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nphp4P59240 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nphp4P59240 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nphp4P59240 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Gm23935-201ENSMUST00000102303 57 ntBASIC21.63■■□□□ 1.05
Nphp4P59240 Gm24270-201ENSMUST00000102326 57 ntBASIC21.63■■□□□ 1.05
Nphp4P59240 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC21.63■■□□□ 1.05
Nphp4P59240 Gm24245-201ENSMUST00000157318 57 ntBASIC21.63■■□□□ 1.05
Nphp4P59240 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
Nphp4P59240 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Gm2756-201ENSMUST00000195851 400 ntBASIC21.63■■□□□ 1.05
Nphp4P59240 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Nphp4P59240 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Nphp4P59240 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Nphp4P59240 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC21.63■■□□□ 1.05
Nphp4P59240 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Nphp4P59240 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nphp4P59240 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC21.63■■□□□ 1.05
Nphp4P59240 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nphp4P59240 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nphp4P59240 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nphp4P59240 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nphp4P59240 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nphp4P59240 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nphp4P59240 Gm13294-201ENSMUST00000121757 1330 ntBASIC21.62■■□□□ 1.05
Nphp4P59240 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nphp4P59240 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nphp4P59240 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC21.62■■□□□ 1.05
Nphp4P59240 Gm43575-201ENSMUST00000196420 516 ntBASIC21.62■■□□□ 1.05
Nphp4P59240 Gm7787-201ENSMUST00000216858 688 ntBASIC21.62■■□□□ 1.05
Nphp4P59240 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
Nphp4P59240 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Nphp4P59240 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 H2af-ps-201ENSMUST00000119066 295 ntBASIC21.61■■□□□ 1.05
Nphp4P59240 Gm14822-201ENSMUST00000122247 291 ntBASIC21.61■■□□□ 1.05
Nphp4P59240 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC21.61■■□□□ 1.05
Nphp4P59240 Gm24513-201ENSMUST00000174964 138 ntBASIC21.61■■□□□ 1.05
Nphp4P59240 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC21.61■■□□□ 1.05
Nphp4P59240 Gm17968-201ENSMUST00000194902 784 ntBASIC21.61■■□□□ 1.05
Nphp4P59240 Bloc1s5-203ENSMUST00000224902 612 ntBASIC21.61■■□□□ 1.05
Nphp4P59240 AC151836.1-202ENSMUST00000226259 753 ntBASIC21.61■■□□□ 1.05
Nphp4P59240 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nphp4P59240 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms