Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nub1P54729 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nub1P54729 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.27■□□□□ 0.36
Nub1P54729 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.27■□□□□ 0.36
Nub1P54729 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nub1P54729 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Nub1P54729 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nub1P54729 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nub1P54729 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.27■□□□□ 0.36
Nub1P54729 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nub1P54729 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nub1P54729 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
Nub1P54729 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Nub1P54729 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Nub1P54729 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Nub1P54729 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nub1P54729 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nub1P54729 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.25■□□□□ 0.35
Nub1P54729 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nub1P54729 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nub1P54729 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nub1P54729 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.24■□□□□ 0.35
Nub1P54729 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Nub1P54729 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nub1P54729 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Nub1P54729 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.24■□□□□ 0.35
Nub1P54729 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.24■□□□□ 0.35
Nub1P54729 Ank2-226ENSMUST00000189368 339 ntBASIC17.24■□□□□ 0.35
Nub1P54729 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nub1P54729 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.24■□□□□ 0.35
Nub1P54729 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.24■□□□□ 0.35
Nub1P54729 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.24■□□□□ 0.35
Nub1P54729 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nub1P54729 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.24■□□□□ 0.35
Nub1P54729 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nub1P54729 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nub1P54729 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nub1P54729 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.23■□□□□ 0.35
Nub1P54729 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.23■□□□□ 0.35
Nub1P54729 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nub1P54729 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.23■□□□□ 0.35
Nub1P54729 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nub1P54729 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.23■□□□□ 0.35
Nub1P54729 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nub1P54729 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms