Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccr4P51680 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccr4P51680 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccr4P51680 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ccr4P51680 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.89□□□□□ -0.03
Ccr4P51680 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Gm10013-201ENSMUST00000106074 672 ntBASIC14.89□□□□□ -0.03
Ccr4P51680 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Gm11355-201ENSMUST00000121120 306 ntBASIC14.89□□□□□ -0.03
Ccr4P51680 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ccr4P51680 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Ccr4P51680 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccr4P51680 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccr4P51680 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Ccr4P51680 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccr4P51680 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccr4P51680 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccr4P51680 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccr4P51680 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.88□□□□□ -0.03
Ccr4P51680 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ccr4P51680 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Gm18032-201ENSMUST00000222541 538 ntBASIC14.88□□□□□ -0.03
Ccr4P51680 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccr4P51680 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccr4P51680 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr4P51680 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ccr4P51680 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.87□□□□□ -0.03
Ccr4P51680 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccr4P51680 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ccr4P51680 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccr4P51680 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.87□□□□□ -0.03
Ccr4P51680 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccr4P51680 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccr4P51680 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ccr4P51680 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ccr4P51680 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccr4P51680 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr4P51680 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr4P51680 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms