Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lhx3P50481 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.25■□□□□ 0.19
Lhx3P50481 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lhx3P50481 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Lhx3P50481 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Lhx3P50481 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lhx3P50481 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lhx3P50481 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.24■□□□□ 0.19
Lhx3P50481 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lhx3P50481 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lhx3P50481 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.24■□□□□ 0.19
Lhx3P50481 Gm6257-201ENSMUST00000163864 910 ntBASIC16.24■□□□□ 0.19
Lhx3P50481 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.24■□□□□ 0.19
Lhx3P50481 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.24■□□□□ 0.19
Lhx3P50481 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lhx3P50481 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lhx3P50481 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.24■□□□□ 0.19
Lhx3P50481 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lhx3P50481 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Lhx3P50481 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.23■□□□□ 0.19
Lhx3P50481 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm8097-201ENSMUST00000117903 829 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.23■□□□□ 0.19
Lhx3P50481 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm8825-201ENSMUST00000182565 998 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm4518-201ENSMUST00000182638 718 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm5864-201ENSMUST00000202263 970 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm6296-201ENSMUST00000222599 943 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.23■□□□□ 0.19
Lhx3P50481 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Lhx3P50481 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.23■□□□□ 0.19
Lhx3P50481 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.23■□□□□ 0.19
Lhx3P50481 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lhx3P50481 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Lhx3P50481 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Lhx3P50481 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lhx3P50481 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms