Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.02■□□□□ 0.64
Ercc3P49135 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Ercc3P49135 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.02■□□□□ 0.64
Ercc3P49135 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.02■□□□□ 0.64
Ercc3P49135 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.02■□□□□ 0.64
Ercc3P49135 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Ercc3P49135 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ercc3P49135 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.02■□□□□ 0.63
Ercc3P49135 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ercc3P49135 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
Ercc3P49135 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ercc3P49135 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ercc3P49135 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ercc3P49135 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.01■□□□□ 0.63
Ercc3P49135 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Ercc3P49135 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Ercc3P49135 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ercc3P49135 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ercc3P49135 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Ercc3P49135 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ercc3P49135 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ercc3P49135 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc3P49135 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc3P49135 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc3P49135 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc3P49135 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19■□□□□ 0.63
Ercc3P49135 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19■□□□□ 0.63
Ercc3P49135 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ercc3P49135 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ercc3P49135 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ercc3P49135 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ercc3P49135 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.99■□□□□ 0.63
Ercc3P49135 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ercc3P49135 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Ercc3P49135 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Ercc3P49135 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Ercc3P49135 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.99■□□□□ 0.63
Ercc3P49135 Gm34391-201ENSMUST00000203706 907 ntBASIC18.99■□□□□ 0.63
Ercc3P49135 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Ercc3P49135 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.99■□□□□ 0.63
Ercc3P49135 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ercc3P49135 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ercc3P49135 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.98■□□□□ 0.63
Ercc3P49135 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ercc3P49135 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Ercc3P49135 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms