Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ptx3P48759 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Ptx3P48759 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptx3P48759 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ptx3P48759 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptx3P48759 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptx3P48759 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptx3P48759 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ptx3P48759 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ptx3P48759 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Ptx3P48759 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.87□□□□□ -0.03
Ptx3P48759 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.87□□□□□ -0.03
Ptx3P48759 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ptx3P48759 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Ptx3P48759 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Ptx3P48759 Gm6376-201ENSMUST00000209407 580 ntBASIC14.87□□□□□ -0.03
Ptx3P48759 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.87□□□□□ -0.03
Ptx3P48759 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.87□□□□□ -0.03
Ptx3P48759 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.87□□□□□ -0.03
Ptx3P48759 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Ptx3P48759 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ptx3P48759 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ptx3P48759 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.86□□□□□ -0.03
Ptx3P48759 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.86□□□□□ -0.03
Ptx3P48759 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ptx3P48759 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ptx3P48759 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ptx3P48759 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ptx3P48759 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.85□□□□□ -0.03
Ptx3P48759 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.85□□□□□ -0.03
Ptx3P48759 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.85□□□□□ -0.03
Ptx3P48759 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Ptx3P48759 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Gm44771-201ENSMUST00000206975 626 ntBASIC14.85□□□□□ -0.03
Ptx3P48759 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ptx3P48759 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ptx3P48759 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.84□□□□□ -0.03
Ptx3P48759 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ptx3P48759 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ptx3P48759 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ptx3P48759 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.84□□□□□ -0.03
Ptx3P48759 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ptx3P48759 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.84□□□□□ -0.03
Ptx3P48759 Gm9172-201ENSMUST00000212092 954 ntBASIC14.84□□□□□ -0.03
Ptx3P48759 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms