Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Gm27622-201ENSMUST00000183779 60 ntBASIC19.25■□□□□ 0.67
Nedd4P46935 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd4P46935 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd4P46935 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd4P46935 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nedd4P46935 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd4P46935 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd4P46935 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd4P46935 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd4P46935 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nedd4P46935 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.24■□□□□ 0.67
Nedd4P46935 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd4P46935 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.24■□□□□ 0.67
Nedd4P46935 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.24■□□□□ 0.67
Nedd4P46935 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC19.24■□□□□ 0.67
Nedd4P46935 Gm8344-201ENSMUST00000119813 856 ntBASIC19.24■□□□□ 0.67
Nedd4P46935 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd4P46935 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.24■□□□□ 0.67
Nedd4P46935 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
Nedd4P46935 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.24■□□□□ 0.67
Nedd4P46935 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd4P46935 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd4P46935 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd4P46935 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd4P46935 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nedd4P46935 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.24■□□□□ 0.67
Nedd4P46935 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nedd4P46935 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.23■□□□□ 0.67
Nedd4P46935 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Gm15358-201ENSMUST00000119249 520 ntBASIC19.23■□□□□ 0.67
Nedd4P46935 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.23■□□□□ 0.67
Nedd4P46935 Rprl2-201ENSMUST00000157150 290 ntBASIC19.23■□□□□ 0.67
Nedd4P46935 Gm27437-201ENSMUST00000183429 107 ntBASIC19.23■□□□□ 0.67
Nedd4P46935 Gm43125-201ENSMUST00000201724 730 ntBASIC19.23■□□□□ 0.67
Nedd4P46935 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.23■□□□□ 0.67
Nedd4P46935 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.23■□□□□ 0.67
Nedd4P46935 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.23■□□□□ 0.67
Nedd4P46935 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.23■□□□□ 0.67
Nedd4P46935 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nedd4P46935 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nedd4P46935 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.22■□□□□ 0.67
Nedd4P46935 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nedd4P46935 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC19.22■□□□□ 0.67
Nedd4P46935 Gm20553-201ENSMUST00000204205 844 ntBASIC19.22■□□□□ 0.67
Nedd4P46935 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nedd4P46935 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.22■□□□□ 0.67
Nedd4P46935 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nedd4P46935 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nedd4P46935 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nedd4P46935 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Nedd4P46935 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC19.21■□□□□ 0.67
Nedd4P46935 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC19.21■□□□□ 0.67
Nedd4P46935 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.21■□□□□ 0.67
Nedd4P46935 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.21■□□□□ 0.67
Nedd4P46935 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Nedd4P46935 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Nedd4P46935 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nedd4P46935 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nedd4P46935 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nedd4P46935 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Nedd4P46935 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.2■□□□□ 0.66
Nedd4P46935 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC19.2■□□□□ 0.66
Nedd4P46935 Gm18489-201ENSMUST00000172565 551 ntBASIC19.2■□□□□ 0.66
Nedd4P46935 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.2■□□□□ 0.66
Nedd4P46935 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nedd4P46935 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.2■□□□□ 0.66
Nedd4P46935 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms