Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Vps4bP46467 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vps4bP46467 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.31■□□□□ 0.2
Vps4bP46467 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps4bP46467 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.3■□□□□ 0.2
Vps4bP46467 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps4bP46467 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Vps4bP46467 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Vps4bP46467 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Vps4bP46467 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.3■□□□□ 0.2
Vps4bP46467 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.3■□□□□ 0.2
Vps4bP46467 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.3■□□□□ 0.2
Vps4bP46467 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.3■□□□□ 0.2
Vps4bP46467 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Vps4bP46467 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Vps4bP46467 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vps4bP46467 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Vps4bP46467 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.29■□□□□ 0.2
Vps4bP46467 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Vps4bP46467 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vps4bP46467 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Vps4bP46467 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps4bP46467 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps4bP46467 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Vps4bP46467 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.28■□□□□ 0.2
Vps4bP46467 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps4bP46467 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.28■□□□□ 0.2
Vps4bP46467 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.28■□□□□ 0.2
Vps4bP46467 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.28■□□□□ 0.2
Vps4bP46467 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps4bP46467 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Vps4bP46467 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Vps4bP46467 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.27■□□□□ 0.2
Vps4bP46467 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Vps4bP46467 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.27■□□□□ 0.2
Vps4bP46467 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps4bP46467 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.27■□□□□ 0.2
Vps4bP46467 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps4bP46467 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms