Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.56■□□□□ 0.24
Msh2P43247 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.56■□□□□ 0.24
Msh2P43247 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.56■□□□□ 0.24
Msh2P43247 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Msh2P43247 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.56■□□□□ 0.24
Msh2P43247 Gm22697-201ENSMUST00000175194 63 ntBASIC16.56■□□□□ 0.24
Msh2P43247 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Msh2P43247 Gm18101-201ENSMUST00000215769 548 ntBASIC16.56■□□□□ 0.24
Msh2P43247 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Msh2P43247 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Msh2P43247 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Msh2P43247 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Msh2P43247 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Msh2P43247 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Msh2P43247 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.55■□□□□ 0.24
Msh2P43247 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Msh2P43247 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.55■□□□□ 0.24
Msh2P43247 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.55■□□□□ 0.24
Msh2P43247 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.55■□□□□ 0.24
Msh2P43247 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Gm10566-201ENSMUST00000086739 996 ntBASIC16.55■□□□□ 0.24
Msh2P43247 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Msh2P43247 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Msh2P43247 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Msh2P43247 Actl10-202ENSMUST00000226583 1501 ntBASIC16.55■□□□□ 0.24
Msh2P43247 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Msh2P43247 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.54■□□□□ 0.24
Msh2P43247 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Msh2P43247 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Msh2P43247 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 App-207ENSMUST00000227737 2827 ntBASIC16.53■□□□□ 0.24
Msh2P43247 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Msh2P43247 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.53■□□□□ 0.24
Msh2P43247 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.53■□□□□ 0.24
Msh2P43247 Gm10013-201ENSMUST00000106074 672 ntBASIC16.53■□□□□ 0.24
Msh2P43247 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.53■□□□□ 0.24
Msh2P43247 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh2P43247 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh2P43247 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh2P43247 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Msh2P43247 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh2P43247 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh2P43247 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms