Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Rfc1P35601 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfc1P35601 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Rfc1P35601 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rfc1P35601 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rfc1P35601 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.96■□□□□ 0.31
Rfc1P35601 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rfc1P35601 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.96■□□□□ 0.31
Rfc1P35601 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.96■□□□□ 0.31
Rfc1P35601 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Rfc1P35601 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfc1P35601 App-207ENSMUST00000227737 2827 ntBASIC16.96■□□□□ 0.3
Rfc1P35601 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc1P35601 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc1P35601 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc1P35601 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfc1P35601 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.95■□□□□ 0.3
Rfc1P35601 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Gm10517-202ENSMUST00000192970 758 ntBASIC16.95■□□□□ 0.3
Rfc1P35601 Gm43183-201ENSMUST00000200632 547 ntBASIC16.95■□□□□ 0.3
Rfc1P35601 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfc1P35601 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rfc1P35601 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfc1P35601 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfc1P35601 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rfc1P35601 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfc1P35601 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfc1P35601 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.95■□□□□ 0.3
Rfc1P35601 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rfc1P35601 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Gm10698-201ENSMUST00000182663 604 ntBASIC16.94■□□□□ 0.3
Rfc1P35601 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfc1P35601 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rfc1P35601 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.93■□□□□ 0.3
Rfc1P35601 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rfc1P35601 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.93■□□□□ 0.3
Rfc1P35601 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.93■□□□□ 0.3
Rfc1P35601 Gm24841-201ENSMUST00000158676 357 ntBASIC16.93■□□□□ 0.3
Rfc1P35601 Gm20760-201ENSMUST00000179197 648 ntBASIC16.93■□□□□ 0.3
Rfc1P35601 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfc1P35601 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.93■□□□□ 0.3
Rfc1P35601 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.92■□□□□ 0.3
Rfc1P35601 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.92■□□□□ 0.3
Rfc1P35601 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms