Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa1P35582 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa1P35582 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa1P35582 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa1P35582 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.85□□□□□ -0.03
Foxa1P35582 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa1P35582 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Foxa1P35582 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa1P35582 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa1P35582 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.85□□□□□ -0.03
Foxa1P35582 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Foxa1P35582 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.84□□□□□ -0.03
Foxa1P35582 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.84□□□□□ -0.03
Foxa1P35582 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.84□□□□□ -0.03
Foxa1P35582 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.84□□□□□ -0.03
Foxa1P35582 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Foxa1P35582 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Foxa1P35582 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.84□□□□□ -0.03
Foxa1P35582 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Foxa1P35582 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.83□□□□□ -0.03
Foxa1P35582 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Foxa1P35582 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Foxa1P35582 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Foxa1P35582 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Foxa1P35582 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.83□□□□□ -0.04
Foxa1P35582 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Rprl3-201ENSMUST00000157400 290 ntBASIC14.83□□□□□ -0.04
Foxa1P35582 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Foxa1P35582 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.83□□□□□ -0.04
Foxa1P35582 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Foxa1P35582 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Foxa1P35582 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.83□□□□□ -0.04
Foxa1P35582 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Foxa1P35582 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.82□□□□□ -0.04
Foxa1P35582 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.82□□□□□ -0.04
Foxa1P35582 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.82□□□□□ -0.04
Foxa1P35582 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.82□□□□□ -0.04
Foxa1P35582 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Foxa1P35582 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.82□□□□□ -0.04
Foxa1P35582 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.82□□□□□ -0.04
Foxa1P35582 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Foxa1P35582 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Foxa1P35582 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Foxa1P35582 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Foxa1P35582 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms