Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.4■□□□□ 0.54
Vcam1P29533 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Vcam1P29533 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Vcam1P29533 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Vcam1P29533 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.39■□□□□ 0.53
Vcam1P29533 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.39■□□□□ 0.53
Vcam1P29533 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Vcam1P29533 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Gm27300-201ENSMUST00000184085 97 ntBASIC18.39■□□□□ 0.53
Vcam1P29533 Gm27335-201ENSMUST00000184758 97 ntBASIC18.39■□□□□ 0.53
Vcam1P29533 AC131709.1-201ENSMUST00000224731 1180 ntBASIC18.39■□□□□ 0.53
Vcam1P29533 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vcam1P29533 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.38■□□□□ 0.53
Vcam1P29533 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.38■□□□□ 0.53
Vcam1P29533 Gm43575-201ENSMUST00000196420 516 ntBASIC18.38■□□□□ 0.53
Vcam1P29533 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.38■□□□□ 0.53
Vcam1P29533 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vcam1P29533 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.38■□□□□ 0.53
Vcam1P29533 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vcam1P29533 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vcam1P29533 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.37■□□□□ 0.53
Vcam1P29533 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.37■□□□□ 0.53
Vcam1P29533 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.37■□□□□ 0.53
Vcam1P29533 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vcam1P29533 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.36■□□□□ 0.53
Vcam1P29533 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.36■□□□□ 0.53
Vcam1P29533 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.36■□□□□ 0.53
Vcam1P29533 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.36■□□□□ 0.53
Vcam1P29533 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Gm19164-201ENSMUST00000210667 640 ntBASIC18.36■□□□□ 0.53
Vcam1P29533 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.36■□□□□ 0.53
Vcam1P29533 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.36■□□□□ 0.53
Vcam1P29533 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
Vcam1P29533 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vcam1P29533 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Vcam1P29533 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vcam1P29533 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms