Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.14■□□□□ 0.33
Mmp3P28862 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Mmp3P28862 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.14■□□□□ 0.33
Mmp3P28862 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mmp3P28862 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mmp3P28862 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mmp3P28862 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Mmp3P28862 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mmp3P28862 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp3P28862 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.13■□□□□ 0.33
Mmp3P28862 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp3P28862 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp3P28862 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.13■□□□□ 0.33
Mmp3P28862 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.13■□□□□ 0.33
Mmp3P28862 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Mmp3P28862 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.13■□□□□ 0.33
Mmp3P28862 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mmp3P28862 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.12■□□□□ 0.33
Mmp3P28862 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mmp3P28862 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Mmp3P28862 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Mmp3P28862 Gm14140-201ENSMUST00000119999 995 ntBASIC17.12■□□□□ 0.33
Mmp3P28862 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.12■□□□□ 0.33
Mmp3P28862 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.12■□□□□ 0.33
Mmp3P28862 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.12■□□□□ 0.33
Mmp3P28862 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.12■□□□□ 0.33
Mmp3P28862 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mmp3P28862 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Mmp3P28862 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mmp3P28862 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mmp3P28862 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.11■□□□□ 0.33
Mmp3P28862 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Mmp3P28862 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Mmp3P28862 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Gm5682-201ENSMUST00000173402 505 ntBASIC17.11■□□□□ 0.33
Mmp3P28862 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.11■□□□□ 0.33
Mmp3P28862 Gm37935-201ENSMUST00000192012 982 ntBASIC17.11■□□□□ 0.33
Mmp3P28862 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.11■□□□□ 0.33
Mmp3P28862 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Mmp3P28862 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Mmp3P28862 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.1■□□□□ 0.33
Mmp3P28862 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Mmp3P28862 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Mmp3P28862 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms