Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.75■□□□□ 0.43
Hoxc6P10629 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hoxc6P10629 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hoxc6P10629 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.75■□□□□ 0.43
Hoxc6P10629 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.75■□□□□ 0.43
Hoxc6P10629 Gm15358-201ENSMUST00000119249 520 ntBASIC17.75■□□□□ 0.43
Hoxc6P10629 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.75■□□□□ 0.43
Hoxc6P10629 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.75■□□□□ 0.43
Hoxc6P10629 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.75■□□□□ 0.43
Hoxc6P10629 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Gm8396-201ENSMUST00000057361 823 ntBASIC17.75■□□□□ 0.43
Hoxc6P10629 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Hoxc6P10629 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hoxc6P10629 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.75■□□□□ 0.43
Hoxc6P10629 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hoxc6P10629 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hoxc6P10629 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Hoxc6P10629 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hoxc6P10629 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.74■□□□□ 0.43
Hoxc6P10629 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.74■□□□□ 0.43
Hoxc6P10629 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.74■□□□□ 0.43
Hoxc6P10629 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.74■□□□□ 0.43
Hoxc6P10629 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.74■□□□□ 0.43
Hoxc6P10629 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.74■□□□□ 0.43
Hoxc6P10629 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Hoxc6P10629 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.74■□□□□ 0.43
Hoxc6P10629 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hoxc6P10629 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc6P10629 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Hoxc6P10629 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Hoxc6P10629 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc6P10629 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc6P10629 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Hoxc6P10629 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc6P10629 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Hoxc6P10629 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.73■□□□□ 0.43
Hoxc6P10629 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.73■□□□□ 0.43
Hoxc6P10629 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.73■□□□□ 0.43
Hoxc6P10629 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.73■□□□□ 0.43
Hoxc6P10629 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.73■□□□□ 0.43
Hoxc6P10629 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.73■□□□□ 0.43
Hoxc6P10629 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Hoxc6P10629 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc6P10629 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc6P10629 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hoxc6P10629 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Gm17271-201ENSMUST00000165535 355 ntBASIC17.72■□□□□ 0.43
Hoxc6P10629 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.72■□□□□ 0.43
Hoxc6P10629 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.72■□□□□ 0.43
Hoxc6P10629 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hoxc6P10629 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hoxc6P10629 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms