Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.73■□□□□ 0.91
Hoxc9P09633 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Hoxc9P09633 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxc9P09633 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.73■□□□□ 0.91
Hoxc9P09633 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.72■□□□□ 0.91
Hoxc9P09633 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.72■□□□□ 0.91
Hoxc9P09633 AC122024.2-201ENSMUST00000220086 871 ntBASIC20.72■□□□□ 0.91
Hoxc9P09633 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc9P09633 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Hoxc9P09633 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.71■□□□□ 0.91
Hoxc9P09633 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.71■□□□□ 0.91
Hoxc9P09633 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.71■□□□□ 0.91
Hoxc9P09633 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 AC154572.2-201ENSMUST00000225105 997 ntBASIC20.71■□□□□ 0.91
Hoxc9P09633 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Hoxc9P09633 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc9P09633 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hoxc9P09633 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Hoxc9P09633 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gm44492-201ENSMUST00000197012 141 ntBASIC20.7■□□□□ 0.9
Hoxc9P09633 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gm7787-201ENSMUST00000216858 688 ntBASIC20.7■□□□□ 0.9
Hoxc9P09633 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.7■□□□□ 0.9
Hoxc9P09633 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc9P09633 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxc9P09633 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hoxc9P09633 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.69■□□□□ 0.9
Hoxc9P09633 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Hoxc9P09633 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Hoxc9P09633 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.69■□□□□ 0.9
Hoxc9P09633 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.69■□□□□ 0.9
Hoxc9P09633 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.69■□□□□ 0.9
Hoxc9P09633 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxc9P09633 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Hoxc9P09633 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc9P09633 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc9P09633 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc9P09633 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc9P09633 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hoxc9P09633 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc9P09633 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.68■□□□□ 0.9
Hoxc9P09633 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.68■□□□□ 0.9
Hoxc9P09633 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms