Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.03■□□□□ -0
Sod1P08228 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.03■□□□□ -0
Sod1P08228 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC15.03■□□□□ -0
Sod1P08228 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sod1P08228 Gm7787-201ENSMUST00000216858 688 ntBASIC15.03■□□□□ -0
Sod1P08228 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sod1P08228 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sod1P08228 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sod1P08228 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sod1P08228 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sod1P08228 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sod1P08228 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sod1P08228 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sod1P08228 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sod1P08228 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Sod1P08228 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sod1P08228 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sod1P08228 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sod1P08228 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.02■□□□□ -0
Sod1P08228 Gm17968-201ENSMUST00000194902 784 ntBASIC15.02■□□□□ -0
Sod1P08228 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sod1P08228 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sod1P08228 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.02■□□□□ -0
Sod1P08228 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.02■□□□□ -0
Sod1P08228 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sod1P08228 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sod1P08228 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sod1P08228 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sod1P08228 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sod1P08228 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sod1P08228 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sod1P08228 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sod1P08228 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.01□□□□□ -0.01
Sod1P08228 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.01□□□□□ -0.01
Sod1P08228 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Sod1P08228 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.01□□□□□ -0.01
Sod1P08228 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.01□□□□□ -0.01
Sod1P08228 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.01□□□□□ -0.01
Sod1P08228 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Sod1P08228 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sod1P08228 Gm38318-201ENSMUST00000195769 1706 ntBASIC15□□□□□ -0.01
Sod1P08228 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Gm5366-201ENSMUST00000215494 1338 ntBASIC15□□□□□ -0.01
Sod1P08228 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15□□□□□ -0.01
Sod1P08228 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15□□□□□ -0.01
Sod1P08228 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15□□□□□ -0.01
Sod1P08228 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15□□□□□ -0.01
Sod1P08228 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15□□□□□ -0.01
Sod1P08228 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sod1P08228 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15□□□□□ -0.01
Sod1P08228 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Sod1P08228 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15□□□□□ -0.01
Sod1P08228 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sod1P08228 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sod1P08228 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sod1P08228 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sod1P08228 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.99□□□□□ -0.01
Sod1P08228 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Sod1P08228 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sod1P08228 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.99□□□□□ -0.01
Sod1P08228 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sod1P08228 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sod1P08228 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sod1P08228 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Sod1P08228 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sod1P08228 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Sod1P08228 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.99□□□□□ -0.01
Sod1P08228 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms