Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.02□□□□□ -0.33
P06323 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.02□□□□□ -0.33
P06323 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.02□□□□□ -0.33
P06323 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.02□□□□□ -0.33
P06323 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Gm7370-201ENSMUST00000219471 767 ntBASIC13.02□□□□□ -0.33
P06323 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
P06323 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.02□□□□□ -0.33
P06323 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.02□□□□□ -0.33
P06323 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
P06323 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
P06323 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
P06323 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.01□□□□□ -0.33
P06323 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.01□□□□□ -0.33
P06323 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.01□□□□□ -0.33
P06323 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
P06323 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06323 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13□□□□□ -0.33
P06323 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
P06323 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06323 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
P06323 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06323 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06323 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06323 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06323 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13□□□□□ -0.33
P06323 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06323 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
P06323 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06323 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06323 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06323 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13□□□□□ -0.33
P06323 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13□□□□□ -0.33
P06323 Gm37055-201ENSMUST00000191866 133 ntBASIC13□□□□□ -0.33
P06323 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13□□□□□ -0.33
P06323 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06323 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13□□□□□ -0.33
P06323 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06323 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.99□□□□□ -0.33
P06323 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
P06323 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06323 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms