Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.13□□□□□ -0.15
P04224 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
P04224 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
P04224 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
P04224 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Gm10517-202ENSMUST00000192970 758 ntBASIC14.12□□□□□ -0.15
P04224 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
P04224 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
P04224 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
P04224 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
P04224 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
P04224 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
P04224 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.11□□□□□ -0.15
P04224 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.11□□□□□ -0.15
P04224 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.11□□□□□ -0.15
P04224 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
P04224 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
P04224 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P04224 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
P04224 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.1□□□□□ -0.15
P04224 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.1□□□□□ -0.15
P04224 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P04224 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.1□□□□□ -0.15
P04224 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.1□□□□□ -0.15
P04224 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.1□□□□□ -0.15
P04224 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
P04224 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.1□□□□□ -0.15
P04224 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.1□□□□□ -0.15
P04224 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P04224 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms