Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IghmP01872 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
IghmP01872 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
IghmP01872 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.05■□□□□ 0
IghmP01872 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.05■□□□□ -0
IghmP01872 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.05■□□□□ -0
IghmP01872 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
IghmP01872 Mir6982-201ENSMUST00000184354 68 ntBASIC15.05■□□□□ -0
IghmP01872 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.05■□□□□ -0
IghmP01872 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
IghmP01872 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Asic1-205ENSMUST00000228185 1818 ntBASIC15.05■□□□□ -0
IghmP01872 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IghmP01872 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
IghmP01872 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
IghmP01872 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.04■□□□□ -0
IghmP01872 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.04■□□□□ -0
IghmP01872 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
IghmP01872 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.04■□□□□ -0
IghmP01872 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.04■□□□□ -0
IghmP01872 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
IghmP01872 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.04■□□□□ -0
IghmP01872 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IghmP01872 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.03■□□□□ -0
IghmP01872 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Mir770-201ENSMUST00000103252 94 ntBASIC15.03■□□□□ -0
IghmP01872 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
IghmP01872 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.03■□□□□ -0
IghmP01872 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
IghmP01872 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.03■□□□□ -0
IghmP01872 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
IghmP01872 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.03■□□□□ -0
IghmP01872 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
IghmP01872 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.02■□□□□ -0
IghmP01872 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.02■□□□□ -0
IghmP01872 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.02■□□□□ -0
IghmP01872 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
IghmP01872 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.02■□□□□ -0
IghmP01872 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IghmP01872 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
IghmP01872 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
IghmP01872 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IghmP01872 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IghmP01872 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
IghmP01872 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IghmP01872 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IghmP01872 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IghmP01872 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
IghmP01872 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IghmP01872 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IghmP01872 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IghmP01872 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
IghmP01872 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IghmP01872 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms