Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TcraP01849 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
TcraP01849 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TcraP01849 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TcraP01849 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.77□□□□□ -0.53
TcraP01849 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TcraP01849 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
TcraP01849 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
TcraP01849 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
TcraP01849 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.77□□□□□ -0.53
TcraP01849 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TcraP01849 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.77□□□□□ -0.53
TcraP01849 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
TcraP01849 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.77□□□□□ -0.53
TcraP01849 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.76□□□□□ -0.53
TcraP01849 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
TcraP01849 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC11.76□□□□□ -0.53
TcraP01849 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.76□□□□□ -0.53
TcraP01849 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.76□□□□□ -0.53
TcraP01849 Gm11927-201ENSMUST00000118472 759 ntBASIC11.76□□□□□ -0.53
TcraP01849 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.76□□□□□ -0.53
TcraP01849 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
TcraP01849 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
TcraP01849 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.76□□□□□ -0.53
TcraP01849 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.76□□□□□ -0.53
TcraP01849 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
TcraP01849 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
TcraP01849 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
TcraP01849 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
TcraP01849 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
TcraP01849 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.75□□□□□ -0.53
TcraP01849 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
TcraP01849 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Gm43859-201ENSMUST00000200075 1412 ntBASIC11.75□□□□□ -0.53
TcraP01849 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.75□□□□□ -0.53
TcraP01849 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
TcraP01849 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.75□□□□□ -0.53
TcraP01849 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TcraP01849 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.74□□□□□ -0.53
TcraP01849 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms