Protein–RNA interactions for Protein: P01680

Ig kappa chain V-IV region S107B, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01680 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.26□□□□□ -0.13
P01680 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.26□□□□□ -0.13
P01680 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.26□□□□□ -0.13
P01680 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P01680 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.26□□□□□ -0.13
P01680 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P01680 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
P01680 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
P01680 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.25□□□□□ -0.13
P01680 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
P01680 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P01680 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P01680 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.25□□□□□ -0.13
P01680 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Gm7222-201ENSMUST00000117512 906 ntBASIC14.25□□□□□ -0.13
P01680 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
P01680 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.25□□□□□ -0.13
P01680 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.25□□□□□ -0.13
P01680 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.25□□□□□ -0.13
P01680 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.25□□□□□ -0.13
P01680 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P01680 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 AW822252-206ENSMUST00000208904 237 ntBASIC14.24□□□□□ -0.13
P01680 AV026068-213ENSMUST00000223675 1171 ntBASIC14.24□□□□□ -0.13
P01680 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
P01680 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
P01680 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
P01680 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
P01680 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.24□□□□□ -0.13
P01680 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P01680 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
P01680 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
P01680 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.23□□□□□ -0.13
P01680 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
P01680 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P01680 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
P01680 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.23□□□□□ -0.13
P01680 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.23□□□□□ -0.13
P01680 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.23□□□□□ -0.13
P01680 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P01680 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
P01680 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms