Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.52□□□□□ -0.08
Abcd4O89016 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abcd4O89016 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abcd4O89016 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abcd4O89016 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Abcd4O89016 Gm15372-201ENSMUST00000120729 834 ntBASIC14.52□□□□□ -0.09
Abcd4O89016 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Abcd4O89016 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.52□□□□□ -0.09
Abcd4O89016 Gm27459-201ENSMUST00000184860 107 ntBASIC14.52□□□□□ -0.09
Abcd4O89016 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.52□□□□□ -0.09
Abcd4O89016 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.52□□□□□ -0.09
Abcd4O89016 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abcd4O89016 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abcd4O89016 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Abcd4O89016 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.52□□□□□ -0.09
Abcd4O89016 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abcd4O89016 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Abcd4O89016 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abcd4O89016 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Abcd4O89016 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.51□□□□□ -0.09
Abcd4O89016 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.51□□□□□ -0.09
Abcd4O89016 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.51□□□□□ -0.09
Abcd4O89016 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.51□□□□□ -0.09
Abcd4O89016 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Gm13312-201ENSMUST00000119631 718 ntBASIC14.51□□□□□ -0.09
Abcd4O89016 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Gm44430-201ENSMUST00000203376 995 ntBASIC14.51□□□□□ -0.09
Abcd4O89016 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Abcd4O89016 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Abcd4O89016 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Abcd4O89016 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.5□□□□□ -0.09
Abcd4O89016 Gm44771-201ENSMUST00000206975 626 ntBASIC14.5□□□□□ -0.09
Abcd4O89016 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.5□□□□□ -0.09
Abcd4O89016 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Abcd4O89016 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Abcd4O89016 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Abcd4O89016 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Abcd4O89016 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Abcd4O89016 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Abcd4O89016 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Abcd4O89016 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Gm12644-201ENSMUST00000119935 606 ntBASIC14.49□□□□□ -0.09
Abcd4O89016 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.49□□□□□ -0.09
Abcd4O89016 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.49□□□□□ -0.09
Abcd4O89016 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.49□□□□□ -0.09
Abcd4O89016 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.49□□□□□ -0.09
Abcd4O89016 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Abcd4O89016 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Abcd4O89016 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Abcd4O89016 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abcd4O89016 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms