Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.48■□□□□ 0.23
Syn1O88935 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Syn1O88935 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Syn1O88935 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Syn1O88935 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Syn1O88935 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Syn1O88935 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Syn1O88935 Gm25948-201ENSMUST00000175334 112 ntBASIC16.47■□□□□ 0.23
Syn1O88935 Gm4899-201ENSMUST00000178708 719 ntBASIC16.47■□□□□ 0.23
Syn1O88935 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Mir6977-201ENSMUST00000184960 64 ntBASIC16.47■□□□□ 0.23
Syn1O88935 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.47■□□□□ 0.23
Syn1O88935 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Syn1O88935 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.47■□□□□ 0.23
Syn1O88935 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Syn1O88935 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.47■□□□□ 0.23
Syn1O88935 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.47■□□□□ 0.23
Syn1O88935 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Syn1O88935 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.46■□□□□ 0.23
Syn1O88935 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Syn1O88935 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Syn1O88935 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.46■□□□□ 0.23
Syn1O88935 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Syn1O88935 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 Gm13365-201ENSMUST00000121188 973 ntBASIC16.46■□□□□ 0.23
Syn1O88935 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.46■□□□□ 0.23
Syn1O88935 Gm25406-201ENSMUST00000157599 105 ntBASIC16.46■□□□□ 0.23
Syn1O88935 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC16.46■□□□□ 0.23
Syn1O88935 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Syn1O88935 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Syn1O88935 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Syn1O88935 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.45■□□□□ 0.22
Syn1O88935 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.45■□□□□ 0.22
Syn1O88935 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.45■□□□□ 0.22
Syn1O88935 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Syn1O88935 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Gm17968-201ENSMUST00000194902 784 ntBASIC16.45■□□□□ 0.22
Syn1O88935 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.45■□□□□ 0.22
Syn1O88935 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.45■□□□□ 0.22
Syn1O88935 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.45■□□□□ 0.22
Syn1O88935 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.45■□□□□ 0.22
Syn1O88935 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Syn1O88935 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Syn1O88935 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.45■□□□□ 0.22
Syn1O88935 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.45■□□□□ 0.22
Syn1O88935 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Syn1O88935 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.44■□□□□ 0.22
Syn1O88935 Gm14127-201ENSMUST00000117906 678 ntBASIC16.44■□□□□ 0.22
Syn1O88935 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.44■□□□□ 0.22
Syn1O88935 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Syn1O88935 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms