Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Slc28a2O88627 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Gm43799-201ENSMUST00000201845 579 ntBASIC14.29□□□□□ -0.12
Slc28a2O88627 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.29□□□□□ -0.12
Slc28a2O88627 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.29□□□□□ -0.12
Slc28a2O88627 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Slc28a2O88627 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.29□□□□□ -0.12
Slc28a2O88627 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Slc28a2O88627 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Slc28a2O88627 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.28□□□□□ -0.12
Slc28a2O88627 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.28□□□□□ -0.12
Slc28a2O88627 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.28□□□□□ -0.12
Slc28a2O88627 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Slc28a2O88627 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Slc28a2O88627 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Slc28a2O88627 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Slc28a2O88627 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.27□□□□□ -0.12
Slc28a2O88627 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.27□□□□□ -0.12
Slc28a2O88627 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Slc28a2O88627 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Slc28a2O88627 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Slc28a2O88627 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.27□□□□□ -0.13
Slc28a2O88627 Gm15565-201ENSMUST00000118890 427 ntBASIC14.27□□□□□ -0.13
Slc28a2O88627 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.27□□□□□ -0.13
Slc28a2O88627 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.27□□□□□ -0.13
Slc28a2O88627 Mir5130-201ENSMUST00000175160 84 ntBASIC14.27□□□□□ -0.13
Slc28a2O88627 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Slc28a2O88627 Gm7889-201ENSMUST00000185591 958 ntBASIC14.27□□□□□ -0.13
Slc28a2O88627 Gm18959-201ENSMUST00000208954 655 ntBASIC14.27□□□□□ -0.13
Slc28a2O88627 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc28a2O88627 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc28a2O88627 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc28a2O88627 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc28a2O88627 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.27□□□□□ -0.13
Slc28a2O88627 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Slc28a2O88627 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.27□□□□□ -0.13
Slc28a2O88627 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Slc28a2O88627 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc28a2O88627 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc28a2O88627 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Slc28a2O88627 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms