Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp2O88623 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.3■□□□□ 0.2
Usp2O88623 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.3■□□□□ 0.2
Usp2O88623 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Gm10355-201ENSMUST00000097146 517 ntBASIC16.3■□□□□ 0.2
Usp2O88623 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Usp2O88623 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp2O88623 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp2O88623 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp2O88623 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp2O88623 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Usp2O88623 Gm25990-201ENSMUST00000102440 86 ntBASIC16.29■□□□□ 0.2
Usp2O88623 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.29■□□□□ 0.2
Usp2O88623 Mir5131-201ENSMUST00000175426 93 ntBASIC16.29■□□□□ 0.2
Usp2O88623 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp2O88623 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.29■□□□□ 0.2
Usp2O88623 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp2O88623 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.28■□□□□ 0.2
Usp2O88623 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.28■□□□□ 0.2
Usp2O88623 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Gm11780-201ENSMUST00000136880 516 ntBASIC16.28■□□□□ 0.2
Usp2O88623 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp2O88623 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Usp2O88623 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Usp2O88623 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.27■□□□□ 0.2
Usp2O88623 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp2O88623 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp2O88623 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 Gm8655-201ENSMUST00000221159 852 ntBASIC16.27■□□□□ 0.2
Usp2O88623 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Usp2O88623 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Usp2O88623 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp2O88623 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp2O88623 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Usp2O88623 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp2O88623 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp2O88623 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp2O88623 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Usp2O88623 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp2O88623 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Usp2O88623 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp2O88623 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Usp2O88623 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Usp2O88623 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp2O88623 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp2O88623 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.26■□□□□ 0.19
Usp2O88623 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.26■□□□□ 0.19
Usp2O88623 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Usp2O88623 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp2O88623 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp2O88623 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms