Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim1O70400 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim1O70400 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pdlim1O70400 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.83■□□□□ 0.13
Pdlim1O70400 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pdlim1O70400 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.83■□□□□ 0.12
Pdlim1O70400 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Pdlim1O70400 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.83■□□□□ 0.12
Pdlim1O70400 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Gm9172-201ENSMUST00000212092 954 ntBASIC15.83■□□□□ 0.12
Pdlim1O70400 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.83■□□□□ 0.12
Pdlim1O70400 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.83■□□□□ 0.12
Pdlim1O70400 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pdlim1O70400 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pdlim1O70400 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.82■□□□□ 0.12
Pdlim1O70400 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pdlim1O70400 Gm10819-201ENSMUST00000099988 561 ntBASIC15.82■□□□□ 0.12
Pdlim1O70400 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Pdlim1O70400 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim1O70400 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.81■□□□□ 0.12
Pdlim1O70400 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
Pdlim1O70400 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.81■□□□□ 0.12
Pdlim1O70400 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pdlim1O70400 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.81■□□□□ 0.12
Pdlim1O70400 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.81■□□□□ 0.12
Pdlim1O70400 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Pdlim1O70400 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim1O70400 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Pdlim1O70400 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim1O70400 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms