Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gm18421-201ENSMUST00000204122 625 ntBASIC14.57□□□□□ -0.08
Pdlim3O70209 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Pdlim3O70209 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Pdlim3O70209 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.57□□□□□ -0.08
Pdlim3O70209 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Pdlim3O70209 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Pdlim3O70209 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdlim3O70209 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.56□□□□□ -0.08
Pdlim3O70209 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdlim3O70209 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.56□□□□□ -0.08
Pdlim3O70209 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Pdlim3O70209 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.56□□□□□ -0.08
Pdlim3O70209 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pdlim3O70209 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.55□□□□□ -0.08
Pdlim3O70209 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.55□□□□□ -0.08
Pdlim3O70209 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.55□□□□□ -0.08
Pdlim3O70209 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.55□□□□□ -0.08
Pdlim3O70209 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.55□□□□□ -0.08
Pdlim3O70209 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pdlim3O70209 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.55□□□□□ -0.08
Pdlim3O70209 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Pdlim3O70209 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.55□□□□□ -0.08
Pdlim3O70209 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.55□□□□□ -0.08
Pdlim3O70209 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.55□□□□□ -0.08
Pdlim3O70209 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pdlim3O70209 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Pdlim3O70209 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.54□□□□□ -0.08
Pdlim3O70209 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Pdlim3O70209 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim3O70209 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.54□□□□□ -0.08
Pdlim3O70209 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.54□□□□□ -0.08
Pdlim3O70209 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.54□□□□□ -0.08
Pdlim3O70209 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim3O70209 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pdlim3O70209 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pdlim3O70209 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms