Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Cxcl13O55038 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl13O55038 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl13O55038 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl13O55038 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cxcl13O55038 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl13O55038 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl13O55038 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl13O55038 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cxcl13O55038 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.55□□□□□ -0.24
Cxcl13O55038 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl13O55038 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cxcl13O55038 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Gm1401-201ENSMUST00000122048 772 ntBASIC13.54□□□□□ -0.24
Cxcl13O55038 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Gm6550-201ENSMUST00000187574 993 ntBASIC13.54□□□□□ -0.24
Cxcl13O55038 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cxcl13O55038 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cxcl13O55038 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cxcl13O55038 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.53□□□□□ -0.24
Cxcl13O55038 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.53□□□□□ -0.24
Cxcl13O55038 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.53□□□□□ -0.24
Cxcl13O55038 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.53□□□□□ -0.24
Cxcl13O55038 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cxcl13O55038 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cxcl13O55038 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Cxcl13O55038 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cxcl13O55038 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.53□□□□□ -0.24
Cxcl13O55038 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.53□□□□□ -0.24
Cxcl13O55038 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Cxcl13O55038 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl13O55038 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl13O55038 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cxcl13O55038 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl13O55038 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl13O55038 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl13O55038 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cxcl13O55038 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl13O55038 Gm7222-201ENSMUST00000117512 906 ntBASIC13.52□□□□□ -0.25
Cxcl13O55038 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cxcl13O55038 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.52□□□□□ -0.25
Cxcl13O55038 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Cxcl13O55038 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cxcl13O55038 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.52□□□□□ -0.25
Cxcl13O55038 AV026068-213ENSMUST00000223675 1171 ntBASIC13.52□□□□□ -0.25
Cxcl13O55038 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.52□□□□□ -0.25
Cxcl13O55038 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.52□□□□□ -0.25
Cxcl13O55038 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cxcl13O55038 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl13O55038 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.52□□□□□ -0.25
Cxcl13O55038 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.52□□□□□ -0.25
Cxcl13O55038 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl13O55038 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cxcl13O55038 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.52□□□□□ -0.25
Cxcl13O55038 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cxcl13O55038 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cxcl13O55038 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.51□□□□□ -0.25
Cxcl13O55038 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cxcl13O55038 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.51□□□□□ -0.25
Cxcl13O55038 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms