Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Prom1O54990 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Gm2756-201ENSMUST00000195851 400 ntBASIC17.66■□□□□ 0.42
Prom1O54990 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.66■□□□□ 0.42
Prom1O54990 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Prom1O54990 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.66■□□□□ 0.42
Prom1O54990 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.66■□□□□ 0.42
Prom1O54990 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.66■□□□□ 0.42
Prom1O54990 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.66■□□□□ 0.42
Prom1O54990 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.66■□□□□ 0.42
Prom1O54990 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prom1O54990 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Prom1O54990 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.65■□□□□ 0.42
Prom1O54990 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Prom1O54990 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.65■□□□□ 0.42
Prom1O54990 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.65■□□□□ 0.42
Prom1O54990 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.65■□□□□ 0.42
Prom1O54990 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.65■□□□□ 0.42
Prom1O54990 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.65■□□□□ 0.42
Prom1O54990 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.65■□□□□ 0.42
Prom1O54990 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.65■□□□□ 0.42
Prom1O54990 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Prom1O54990 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prom1O54990 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Prom1O54990 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Prom1O54990 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Prom1O54990 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.64■□□□□ 0.41
Prom1O54990 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.64■□□□□ 0.41
Prom1O54990 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.64■□□□□ 0.41
Prom1O54990 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Prom1O54990 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.64■□□□□ 0.41
Prom1O54990 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.64■□□□□ 0.41
Prom1O54990 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Prom1O54990 Mir3113-201ENSMUST00000175478 76 ntBASIC17.64■□□□□ 0.41
Prom1O54990 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Gm27300-201ENSMUST00000184085 97 ntBASIC17.64■□□□□ 0.41
Prom1O54990 Gm27335-201ENSMUST00000184758 97 ntBASIC17.64■□□□□ 0.41
Prom1O54990 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.64■□□□□ 0.41
Prom1O54990 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Prom1O54990 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.64■□□□□ 0.41
Prom1O54990 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Prom1O54990 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.63■□□□□ 0.41
Prom1O54990 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.63■□□□□ 0.41
Prom1O54990 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Prom1O54990 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Prom1O54990 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Prom1O54990 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prom1O54990 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prom1O54990 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Prom1O54990 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prom1O54990 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.62■□□□□ 0.41
Prom1O54990 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.62■□□□□ 0.41
Prom1O54990 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.62■□□□□ 0.41
Prom1O54990 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prom1O54990 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Prom1O54990 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Prom1O54990 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms