Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.12■□□□□ 0.33
Kcnu1O54982 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Kcnu1O54982 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Kcnu1O54982 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Kcnu1O54982 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Kcnu1O54982 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.11■□□□□ 0.33
Kcnu1O54982 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Gm9013-201ENSMUST00000132939 882 ntBASIC17.11■□□□□ 0.33
Kcnu1O54982 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Kcnu1O54982 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Kcnu1O54982 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Kcnu1O54982 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.1■□□□□ 0.33
Kcnu1O54982 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Gm6623-201ENSMUST00000173570 544 ntBASIC17.1■□□□□ 0.33
Kcnu1O54982 Gm5587-201ENSMUST00000206270 674 ntBASIC17.1■□□□□ 0.33
Kcnu1O54982 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Kcnu1O54982 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.1■□□□□ 0.33
Kcnu1O54982 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Kcnu1O54982 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Kcnu1O54982 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Kcnu1O54982 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Kcnu1O54982 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.09■□□□□ 0.33
Kcnu1O54982 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Kcnu1O54982 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.09■□□□□ 0.33
Kcnu1O54982 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Kcnu1O54982 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Kcnu1O54982 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
Kcnu1O54982 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Kcnu1O54982 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.08■□□□□ 0.32
Kcnu1O54982 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Kcnu1O54982 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.08■□□□□ 0.32
Kcnu1O54982 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.08■□□□□ 0.32
Kcnu1O54982 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.08■□□□□ 0.32
Kcnu1O54982 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Kcnu1O54982 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Kcnu1O54982 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Kcnu1O54982 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.07■□□□□ 0.32
Kcnu1O54982 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Kcnu1O54982 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms