Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf13O54965 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf13O54965 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Rnf13O54965 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf13O54965 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Rnf13O54965 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
Rnf13O54965 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.58□□□□□ -0.08
Rnf13O54965 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Rnf13O54965 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.58□□□□□ -0.08
Rnf13O54965 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.58□□□□□ -0.08
Rnf13O54965 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.58□□□□□ -0.08
Rnf13O54965 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rnf13O54965 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Rnf13O54965 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.58□□□□□ -0.08
Rnf13O54965 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Rnf13O54965 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Rnf13O54965 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf13O54965 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.57□□□□□ -0.08
Rnf13O54965 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.57□□□□□ -0.08
Rnf13O54965 Gm27463-201ENSMUST00000183569 57 ntBASIC14.57□□□□□ -0.08
Rnf13O54965 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Rnf13O54965 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.57□□□□□ -0.08
Rnf13O54965 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Rnf13O54965 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Rnf13O54965 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Rnf13O54965 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Rnf13O54965 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.56□□□□□ -0.08
Rnf13O54965 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.56□□□□□ -0.08
Rnf13O54965 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.56□□□□□ -0.08
Rnf13O54965 Gm44450-201ENSMUST00000199528 114 ntBASIC14.56□□□□□ -0.08
Rnf13O54965 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Rnf13O54965 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf13O54965 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf13O54965 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf13O54965 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf13O54965 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rnf13O54965 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf13O54965 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf13O54965 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf13O54965 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms