Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Gm5587-201ENSMUST00000206270 674 ntBASIC16.76■□□□□ 0.27
Per2O54943 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Per2O54943 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Per2O54943 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.75■□□□□ 0.27
Per2O54943 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Per2O54943 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Per2O54943 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Per2O54943 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Per2O54943 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Per2O54943 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Per2O54943 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Per2O54943 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Per2O54943 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Per2O54943 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.73■□□□□ 0.27
Per2O54943 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Per2O54943 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.73■□□□□ 0.27
Per2O54943 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.73■□□□□ 0.27
Per2O54943 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.73■□□□□ 0.27
Per2O54943 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Per2O54943 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Per2O54943 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Per2O54943 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.72■□□□□ 0.27
Per2O54943 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.72■□□□□ 0.27
Per2O54943 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.72■□□□□ 0.27
Per2O54943 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.72■□□□□ 0.27
Per2O54943 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Per2O54943 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Per2O54943 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms