Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ChkaO54804 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
ChkaO54804 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.23■□□□□ 0.19
ChkaO54804 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ChkaO54804 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Gm22697-201ENSMUST00000175194 63 ntBASIC16.23■□□□□ 0.19
ChkaO54804 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ChkaO54804 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ChkaO54804 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ChkaO54804 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.23■□□□□ 0.19
ChkaO54804 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.23■□□□□ 0.19
ChkaO54804 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ChkaO54804 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ChkaO54804 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
ChkaO54804 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
ChkaO54804 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ChkaO54804 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.22■□□□□ 0.19
ChkaO54804 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
ChkaO54804 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ChkaO54804 Gm10231-201ENSMUST00000181584 441 ntBASIC16.22■□□□□ 0.19
ChkaO54804 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.22■□□□□ 0.19
ChkaO54804 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Gm10175-202ENSMUST00000208752 441 ntBASIC16.22■□□□□ 0.19
ChkaO54804 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ChkaO54804 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.22■□□□□ 0.19
ChkaO54804 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.21■□□□□ 0.19
ChkaO54804 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
ChkaO54804 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ChkaO54804 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.21■□□□□ 0.19
ChkaO54804 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.21■□□□□ 0.19
ChkaO54804 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ChkaO54804 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.21■□□□□ 0.19
ChkaO54804 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ChkaO54804 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ChkaO54804 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
ChkaO54804 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.2■□□□□ 0.18
ChkaO54804 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ChkaO54804 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ChkaO54804 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms