Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag2O35638 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag2O35638 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.35■□□□□ 0.53
Stag2O35638 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Stag2O35638 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag2O35638 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag2O35638 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag2O35638 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag2O35638 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Stag2O35638 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Stag2O35638 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.34■□□□□ 0.53
Stag2O35638 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Stag2O35638 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.34■□□□□ 0.53
Stag2O35638 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Gm9172-201ENSMUST00000212092 954 ntBASIC18.34■□□□□ 0.53
Stag2O35638 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Stag2O35638 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Stag2O35638 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Stag2O35638 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.33■□□□□ 0.53
Stag2O35638 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stag2O35638 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stag2O35638 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.33■□□□□ 0.53
Stag2O35638 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stag2O35638 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.33■□□□□ 0.52
Stag2O35638 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.33■□□□□ 0.52
Stag2O35638 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.33■□□□□ 0.52
Stag2O35638 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.33■□□□□ 0.52
Stag2O35638 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Stag2O35638 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Stag2O35638 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.33■□□□□ 0.52
Stag2O35638 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Stag2O35638 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stag2O35638 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.32■□□□□ 0.52
Stag2O35638 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Stag2O35638 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Stag2O35638 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.32■□□□□ 0.52
Stag2O35638 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.32■□□□□ 0.52
Stag2O35638 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Stag2O35638 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Stag2O35638 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stag2O35638 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Stag2O35638 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.31■□□□□ 0.52
Stag2O35638 Gm12497-201ENSMUST00000138778 237 ntBASIC18.31■□□□□ 0.52
Stag2O35638 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Stag2O35638 Gm6376-201ENSMUST00000209407 580 ntBASIC18.31■□□□□ 0.52
Stag2O35638 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.31■□□□□ 0.52
Stag2O35638 Rps4l-201ENSMUST00000071745 943 ntBASIC18.31■□□□□ 0.52
Stag2O35638 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Stag2O35638 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.31■□□□□ 0.52
Stag2O35638 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Stag2O35638 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms