Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.26■□□□□ 0.35
Nr1i3O35627 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1i3O35627 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1i3O35627 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nr1i3O35627 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1i3O35627 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1i3O35627 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1i3O35627 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nr1i3O35627 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1i3O35627 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.26■□□□□ 0.35
Nr1i3O35627 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nr1i3O35627 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Nr1i3O35627 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Nr1i3O35627 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Nr1i3O35627 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nr1i3O35627 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nr1i3O35627 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nr1i3O35627 Mir6404-201ENSMUST00000183699 94 ntBASIC17.25■□□□□ 0.35
Nr1i3O35627 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.25■□□□□ 0.35
Nr1i3O35627 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.25■□□□□ 0.35
Nr1i3O35627 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nr1i3O35627 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.25■□□□□ 0.35
Nr1i3O35627 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nr1i3O35627 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.24■□□□□ 0.35
Nr1i3O35627 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.24■□□□□ 0.35
Nr1i3O35627 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.24■□□□□ 0.35
Nr1i3O35627 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Nr1i3O35627 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.24■□□□□ 0.35
Nr1i3O35627 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Nr1i3O35627 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nr1i3O35627 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nr1i3O35627 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.23■□□□□ 0.35
Nr1i3O35627 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.23■□□□□ 0.35
Nr1i3O35627 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Nr1i3O35627 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Nr1i3O35627 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.23■□□□□ 0.35
Nr1i3O35627 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.23■□□□□ 0.35
Nr1i3O35627 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nr1i3O35627 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Nr1i3O35627 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.22■□□□□ 0.35
Nr1i3O35627 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.22■□□□□ 0.35
Nr1i3O35627 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.22■□□□□ 0.35
Nr1i3O35627 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.22■□□□□ 0.35
Nr1i3O35627 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Nr1i3O35627 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.22■□□□□ 0.35
Nr1i3O35627 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.22■□□□□ 0.35
Nr1i3O35627 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.22■□□□□ 0.35
Nr1i3O35627 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.22■□□□□ 0.35
Nr1i3O35627 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nr1i3O35627 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms