Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Clk2O35491 Haglr-201ENSMUST00000100000 2085 ntBASIC17.4■□□□□ 0.38
Clk2O35491 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.4■□□□□ 0.38
Clk2O35491 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.4■□□□□ 0.38
Clk2O35491 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.4■□□□□ 0.38
Clk2O35491 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
Clk2O35491 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Clk2O35491 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.4■□□□□ 0.38
Clk2O35491 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clk2O35491 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Clk2O35491 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk2O35491 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Clk2O35491 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Clk2O35491 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Clk2O35491 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Clk2O35491 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Clk2O35491 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Gm1401-201ENSMUST00000122048 772 ntBASIC17.39■□□□□ 0.37
Clk2O35491 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Clk2O35491 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.39■□□□□ 0.37
Clk2O35491 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.39■□□□□ 0.37
Clk2O35491 Gm6550-201ENSMUST00000187574 993 ntBASIC17.39■□□□□ 0.37
Clk2O35491 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Clk2O35491 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Clk2O35491 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.39■□□□□ 0.37
Clk2O35491 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk2O35491 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.39■□□□□ 0.37
Clk2O35491 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.38■□□□□ 0.37
Clk2O35491 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.38■□□□□ 0.37
Clk2O35491 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Clk2O35491 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.38■□□□□ 0.37
Clk2O35491 Gm6257-201ENSMUST00000163864 910 ntBASIC17.38■□□□□ 0.37
Clk2O35491 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.38■□□□□ 0.37
Clk2O35491 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.38■□□□□ 0.37
Clk2O35491 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.38■□□□□ 0.37
Clk2O35491 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clk2O35491 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clk2O35491 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Clk2O35491 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk2O35491 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Clk2O35491 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Clk2O35491 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.37■□□□□ 0.37
Clk2O35491 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.37■□□□□ 0.37
Clk2O35491 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Clk2O35491 Gm27646-201ENSMUST00000183989 110 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms