Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Raet1aO08602 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.24□□□□□ -0.13
Raet1aO08602 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Raet1aO08602 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.24□□□□□ -0.13
Raet1aO08602 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Raet1aO08602 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.24□□□□□ -0.13
Raet1aO08602 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Raet1aO08602 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Raet1aO08602 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Raet1aO08602 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.23□□□□□ -0.13
Raet1aO08602 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Raet1aO08602 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Raet1aO08602 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Raet1aO08602 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Raet1aO08602 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.23□□□□□ -0.13
Raet1aO08602 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Raet1aO08602 Gm45328-201ENSMUST00000210942 917 ntBASIC14.23□□□□□ -0.13
Raet1aO08602 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.23□□□□□ -0.13
Raet1aO08602 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.23□□□□□ -0.13
Raet1aO08602 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Raet1aO08602 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.23□□□□□ -0.13
Raet1aO08602 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Raet1aO08602 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Raet1aO08602 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Raet1aO08602 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.22□□□□□ -0.13
Raet1aO08602 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Raet1aO08602 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Raet1aO08602 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Raet1aO08602 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Raet1aO08602 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Raet1aO08602 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Raet1aO08602 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.21□□□□□ -0.13
Raet1aO08602 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Raet1aO08602 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.21□□□□□ -0.13
Raet1aO08602 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Raet1aO08602 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.21□□□□□ -0.13
Raet1aO08602 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Raet1aO08602 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.21□□□□□ -0.13
Raet1aO08602 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.21□□□□□ -0.13
Raet1aO08602 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Raet1aO08602 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms