Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shisa8J3QNX5 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Gm13186-201ENSMUST00000118031 316 ntBASIC14.67□□□□□ -0.06
Shisa8J3QNX5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.67□□□□□ -0.06
Shisa8J3QNX5 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.67□□□□□ -0.06
Shisa8J3QNX5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shisa8J3QNX5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.66□□□□□ -0.06
Shisa8J3QNX5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.66□□□□□ -0.06
Shisa8J3QNX5 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shisa8J3QNX5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shisa8J3QNX5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms