Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav13d-3J3QMG8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Olfr129-201ENSMUST00000122318 993 ntBASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav13d-3J3QMG8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Trav13d-3J3QMG8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Gm27742-201ENSMUST00000184667 60 ntBASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav13d-3J3QMG8 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms