Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chrna9G3X8Z7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chrna9G3X8Z7 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Gm15794-201ENSMUST00000120182 631 ntBASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna9G3X8Z7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.22■□□□□ 0.35
Chrna9G3X8Z7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Gm11950-201ENSMUST00000121615 838 ntBASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Gm29518-201ENSMUST00000190858 372 ntBASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna9G3X8Z7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms