Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trim55G3X8Y1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim55G3X8Y1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim55G3X8Y1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim55G3X8Y1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Gm9988-201ENSMUST00000069786 435 ntBASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.53■□□□□ 0.24
Trim55G3X8Y1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms