Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Mir7085-201ENSMUST00000184353 66 ntBASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Idnk-204ENSMUST00000226010 1898 ntBASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nkx1-1G3UXB3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Gm7488-201ENSMUST00000117148 684 ntBASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 AC154683.1-201ENSMUST00000228409 1284 ntBASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.34■□□□□ 0.53
Nkx1-1G3UXB3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Nkx1-1G3UXB3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Nkx1-1G3UXB3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx1-1G3UXB3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.33■□□□□ 0.53
Nkx1-1G3UXB3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nkx1-1G3UXB3 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Gm12656-201ENSMUST00000118149 577 ntBASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Gm4732-201ENSMUST00000118778 473 ntBASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Gm37153-201ENSMUST00000193637 231 ntBASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Gm7730-201ENSMUST00000212486 454 ntBASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nkx1-1G3UXB3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Gm14905-201ENSMUST00000122351 639 ntBASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Gm44607-201ENSMUST00000205611 1090 ntBASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 AC154757.2-201ENSMUST00000228885 743 ntBASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Nkx1-1G3UXB3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms